Assignment 3
Genomics

Assignment Setup Instructions

  • You do not need to change the configuration for your VM. Make sure you have 4 cores, 20GB of RAM, and an NVIDIA Tesla T4 GPU. Download the assignment files on your local machine and then unzip them:
    
                        wget https://biods220.stanford.edu/notebooks/assign3.zip
                        unzip assign3.zip
                      
  • You are all set! Good luck and we hope you learn a lot on Assignment 3!

    What to hand in for this assignment: Submit one PDF file containing all your notebook solutions (code + written). To convert your notebook to PDF, go to File > Download as > PDF via LaTeX. Alternatively, if you encounter issues with converting to PDF using LaTeX, you can also convert to HTML (File > Download as > HTML) and then "Save to PDF" by printing. Concatenate the PDFs from both parts into one and make sure that both the coding sections and the written sections are visible in the PDFs prior to submission.